Probably, but I'm guessing not first ballot. He's only got one 2nd team All-pro. Never showed up in MVP voting. Was good, not great in both SBs and didn't win MVP in the first one. Might have in the second, although if they run Lynch and win, he probably gets it. Probably the third best QB in the NFC during his time with Seattle behind Rodgers and Brees. Some don't put a lot of weight on Pro Bowls, but having 10 is a good indicator of sustained success.
Honestly, Stafford, Flacco, and Wilson are going to be interesting HOF cases. That SB win will be doing the heavy lifting, and only Flacco has a SB MVP to go with it.